Holistic evaluation of large language models for medical tasks with MedHELM.

Holistic evaluation of large language models for medical tasks with MedHELM. Nature medicine Bedi, S., Cui, H., Fuentes, M., Unell, A., Wornow, M., Banda, J. M., Kotecha, N., Keyes, T., Mai, Y., Oez, M., Qiu, H., Jain, S., Schettini, L., Kashyap, M., Fries, J. A., Swaminathan, A., Chung, P., Haredasht, F. N., Lopez, I., Aali, A., Tse, G., Nayak, A., Vedak, S., Jain, S. S., Patel, B., Fayanju, O., Shah, S., Goh, E., Yao, D. H., Soetikno, B., Reis, E., Gatidis, S., Divi, V., Capasso, R., Saralkar, R., Chiang, C. C., Jindal, J., Pham, T., Ghoddusi, F., Lin, S., Chiou, A. S., Hong, H. J., Roy, M., Gensheimer, M. F., Patel, H., Schulman, K., Dash, D., Char, D., Downing, L., Grolleau, F., Black, K., Mieso, B., Zahedivash, A., Yim, W. W., Sharma, H., Lee, T., Kirsch, H., Lee, J., Ambers, N., Lugtu, C., Sharma, A., Mawji, B., Alekseyev, A., Zhou, V., Kakkar, V., Helzer, J., Revri, A., Bannett, Y., Daneshjou, R., Chen, J., Alsentzer, E., Morse, K., Ravi, N., Aghaeepour, N., Kennedy, V., Chaudhari, A., Wang, T., Koyejo, S., Lungren, M. P., Horvitz, E., Liang, P., Pfeffer, M. A., Shah, N. H. 2026

Abstract

While large language models (LLMs) achieve near-perfect scores on medical licensing exams, these evaluations inadequately reflect the complexity and diversity of real-world clinical practice. Here we introduce MedHELM, an extensible evaluation framework with three contributions. First, a clinician-validated taxonomy organizing medical AI applications into five categories that mirror real clinical tasks-clinical decision support (diagnostic decisions, treatment planning), clinical note generation (visit documentation, procedure reports), patient communication (education materials, care instructions), medical research (literature analysis, clinical data analysis) and administration (scheduling, workflow coordination). These encompass 22 subcategories and 121 specific tasks reflecting daily medical practice. Second, a comprehensive benchmark suite of 37 evaluations covering all subcategories. Third, systematic comparison of nine frontier LLMs-Claude 3.5 Sonnet, Claude 3.7 Sonnet, DeepSeek R1, Gemini 1.5 Pro, Gemini 2.0 Flash, GPT-4o, GPT-4o mini, Llama 3.3 and o3-mini-using an automated LLM-jury evaluation method. Our LLM-jury uses multiple AI evaluators to assess model outputs against expert-defined criteria. Advanced reasoning models (DeepSeek R1, o3-mini) demonstrated superior performance with win rates of 66%, although Claude 3.5 Sonnet achieved comparable results at 15% lower computational cost. These results not only highlight current model capabilities but also demonstrate how MedHELM could enable evidence-based selection of medical AI systems for healthcare applications.

View details for DOI 10.1038/s41591-025-04151-2

View details for PubMedID 41559415

View details for PubMedCentralID 10916499