Transmission of HIV-1 in the face of neutralizing antibodies
Blish, C. A., Blay, W. A., Haigwood, N. L., & Overbaughl, J. (2007). Transmission of HIV-1 in the face of neutralizing antibodies. CURRENT HIV RESEARCH, 5(6), 578–587.

Enhancing exposure of HIV-1 neutralization epitopes through mutations in gp41
Blish, C. A., Nguyen, M.-A., & Overbaugh, J. (2008). Enhancing exposure of HIV-1 neutralization epitopes through mutations in gp41. PLOS MEDICINE, 5(1), 90–103.

Human Immunodeficiency Virus Type 1 Superinfection Occurs despite Relatively Robust Neutralizing Antibody Responses
Blish, C. A., Dogan, O. C., Derby, N. R., Nguyen, M.-A., Chohan, B., Richardson, B. A., & Overbaugh, J. (2008). Human Immunodeficiency Virus Type 1 Superinfection Occurs despite Relatively Robust Neutralizing Antibody Responses. JOURNAL OF VIROLOGY, 82(24), 12094–12103.

Cross-Subtype Neutralization Sensitivity despite Monoclonal Antibody Resistance among Early Subtype A, C, and D Envelope Variants of Human Immunodeficiency Virus Type 1
Blish, C. A., Jalalian-Lechak, Z., Rainwater, S., Nguyen, M.-A., Dogan, O. C., & Overbaugh, J. (2009). Cross-Subtype Neutralization Sensitivity despite Monoclonal Antibody Resistance among Early Subtype A, C, and D Envelope Variants of Human Immunodeficiency Virus Type 1. JOURNAL OF VIROLOGY, 83(15), 7783–7788.

Breadth of Neutralizing Antibody Response to Human Immunodeficiency Virus Type 1 Is Affected by Factors Early in Infection but Does Not Influence Disease Progression
Piantadosi, A., Panteleeff, D., Blish, C. A., Baeten, J. M., Jaoko, W., McClelland, R. S., & Overbaugh, J. (2009). Breadth of Neutralizing Antibody Response to Human Immunodeficiency Virus Type 1 Is Affected by Factors Early in Infection but Does Not Influence Disease Progression. JOURNAL OF VIROLOGY, 83(19), 10269–10274.

Comparative Immunogenicity of Subtype A Human Immunodeficiency Virus Type 1 Envelope Exhibiting Differential Exposure of Conserved Neutralization Epitopes
Blish, C. A., Sather, D. N., Sellhorn, G., Stamatatos, L., Sun, Y., Srivastava, I., … Hu, S.-L. (2010). Comparative Immunogenicity of Subtype A Human Immunodeficiency Virus Type 1 Envelope Exhibiting Differential Exposure of Conserved Neutralization Epitopes. JOURNAL OF VIROLOGY, 84(5), 2573–2584.

Changes in Plasma Cytokines after Treatment of Ascaris lumbricoides Infection in Individuals with HIV-1 Infection
Blish, C. A., Sangare, L., Herrin, B. R., Richardson, B. A., John-Stewart, G., & Walson, J. L. (2010). Changes in Plasma Cytokines after Treatment of Ascaris lumbricoides Infection in Individuals with HIV-1 Infection. JOURNAL OF INFECTIOUS DISEASES, 201(12), 1816–1821.

Hormonal Contraception and HIV-1 Transmission
Blish, C. A., & Baeten, J. M. (2011). Hormonal Contraception and HIV-1 Transmission. AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY, 65(3), 302–307.

The Breadth and Potency of Passively Acquired Human Immunodeficiency Virus Type 1-Specific Neutralizing Antibodies Do Not Correlate with the Risk of Infant Infection
Lynch, J. B., Nduati, R., Blish, C. A., Richardson, B. A., Mabuka, J. M., Jalalian-Lechak, Z., … Overbaugh, J. (2011). The Breadth and Potency of Passively Acquired Human Immunodeficiency Virus Type 1-Specific Neutralizing Antibodies Do Not Correlate with the Risk of Infant Infection. JOURNAL OF VIROLOGY, 85(11), 5252–5261.

Measurements of Immune Responses for Establishing Correlates of Vaccine Protection Against HIV
Burgers, W. A., Manrique, A., Masopust, D., McKinnon, L. R., Reynolds, M. R., Rolland, M., … Sather, D. N. (2012). Measurements of Immune Responses for Establishing Correlates of Vaccine Protection Against HIV. AIDS RESEARCH AND HUMAN RETROVIRUSES, 28(7), 641–48.

The role of amino acid changes in the human immunodeficiency virus type 1 transmembrane domain in antibody binding and neutralization
Lovelace, E., Xu, H., Blish, C. A., Strong, R., & Overbaugh, J. (2011). The role of amino acid changes in the human immunodeficiency virus type 1 transmembrane domain in antibody binding and neutralization. VIROLOGY, 421(2), 235–244.

Cellular immune responses and susceptibility to HIV-1 superinfection: a case-control study
Blish, C. A., Dogan, O. C., Jaoko, W., McClelland, R. S., Mandaliya, K., Odem-Davis, K. S., … Overbaugh, J. (2012). Cellular immune responses and susceptibility to HIV-1 superinfection: a case-control study. AIDS, 26(5), 643–46.

Genital Inflammation Predicts HIV-1 Shedding Independent of Plasma Viral Load and Systemic Inflammation
Blish, C. A., McClelland, R. S., Richardson, B. A., Jaoko, W., Mandaliya, K., Baeten, J. M., & Overbaugh, J. (2012). Genital Inflammation Predicts HIV-1 Shedding Independent of Plasma Viral Load and Systemic Inflammation. JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES, 61(4), 436–440.

HIV-1 Transmission Goes Retro (Steps Back)
Blish, C. A. (2012). HIV-1 Transmission Goes Retro (Steps Back). JOURNAL OF INFECTIOUS DISEASES, 206(9), 1336–1338.

The impact of HIV-1 infection and exposure on natural killer (NK) cell phenotype in Kenyan infants during the first year of life.
Slyker, J. A., Lohman-Payne, B., John-Stewart, G. C., Dong, T., Mbori-Ngacha, D., Tapia, K., … Blish, C. A. (2012). The impact of HIV-1 infection and exposure on natural killer (NK) cell phenotype in Kenyan infants during the first year of life. Frontiers in Immunology, 3, 399-?

Antibody-dependent cell-mediated virus inhibition antibody activity does not correlate with risk of HIV-1 superinfection.
Forthal, D. N., Landucci, G., Chohan, B., Richardson, B. A., McClelland, R. S., Jaoko, W., … Overbaugh, J. (2013). Antibody-dependent cell-mediated virus inhibition antibody activity does not correlate with risk of HIV-1 superinfection. Journal of Acquired Immune Deficiency Syndromes , 63(1), 31–33.

LOSS OF CELL-CYCLE CONTROLS IN APOPTOTIC LYMPHOBLASTS OF THE BURSA OF FABRICIUS
Neiman, P. E., BLISH, C., HEYDT, C., Loring, G., & THOMAS, S. J. (1994). LOSS OF CELL-CYCLE CONTROLS IN APOPTOTIC LYMPHOBLASTS OF THE BURSA OF FABRICIUS. MOLECULAR BIOLOGY OF THE CELL, 5(7), 763–772.

Systemic Cytokine Levels Show Limited Correlation With Risk of HIV-1 Acquisition.
Lehman, D. A., Ronen, K., Blish, C. A., Baeten, J. M., Jalalian-Lechak, Z., Jaoko, W., … Overbaugh, J. (2014). Systemic Cytokine Levels Show Limited Correlation With Risk of HIV-1 Acquisition. Journal of Acquired Immune Deficiency Syndromes , 66(2), 135–39.

Association between Cellular Immune Activation, Target Cell Frequency, and Risk of Human Immunodeficiency Virus Type 1 Superinfection
Blish, C. A., Dogan, O. C., Jaoko, W., McClelland, R. S., Mandaliya, K., Odem-Davis, K., … Overbaugh, J. (2014). Association between Cellular Immune Activation, Target Cell Frequency, and Risk of Human Immunodeficiency Virus Type 1 Superinfection. JOURNAL OF VIROLOGY, 88(10), 5894–99.

Association between Latent Proviral Characteristics and Immune Activation in Antiretrovirus-Treated Human Immunodeficiency Virus Type 1-Infected Adults.
Liang, E. C., Sceats, L., Bayless, N. L., Strauss-Albee, D. M., Kubo, J., Grant, P. M., … Blish, C. A. (2014). Association between Latent Proviral Characteristics and Immune Activation in Antiretrovirus-Treated Human Immunodeficiency Virus Type 1-Infected Adults. Journal of Virology, 88(15), 8629–39.

Genetic and environmental determinants of human NK cell diversity revealed by mass cytometry.
Horowitz, A., Strauss-Albee, D. M., Leipold, M., Kubo, J., Nemat-Gorgani, N., Dogan, O. C., … Blish, C. A. (2013). Genetic and environmental determinants of human NK cell diversity revealed by mass cytometry. Science Translational Medicine, 5(208), 208ra145-?

Enhanced natural killer-cell and T-cell responses to influenza A virus during pregnancy.
Kay, A. W., Fukuyama, J., Aziz, N., Dekker, C. L., Mackey, S., Swan, G. E., … Blish, C. A. (2014). Enhanced natural killer-cell and T-cell responses to influenza A virus during pregnancy. Proceedings of the National Academy of Sciences of the United States of America, 111(40), 14506–11.

Delayed BCG vaccination--time to take a shot.
Kay, A. W., & Blish, C. A. (2015). Delayed BCG vaccination--time to take a shot. Journal of Infectious Diseases, 211(3), 335–37.

Coordinated Regulation of NK Receptor Expression in the Maturing Human Immune System
Strauss-Albee, D. M., Horowitz, A., Parham, P., & Blish, C. A. (2014). Coordinated Regulation of NK Receptor Expression in the Maturing Human Immune System. JOURNAL OF IMMUNOLOGY, 193(10), 4871–79.

Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells.
Grow, E. J., Flynn, R. A., Chavez, S. L., Bayless, N. L., Wossidlo, M., Wesche, D. J., … Wysocka, J. (2015). Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells. Nature, 522(7555), 221–25.

Pregnancy Does Not Attenuate the Antibody or Plasmablast Response to Inactivated Influenza Vaccine.
Kay, A. W., Bayless, N. L., Fukuyama, J., Aziz, N., Dekker, C. L., Mackey, S., … Blish, C. A. (2015). Pregnancy Does Not Attenuate the Antibody or Plasmablast Response to Inactivated Influenza Vaccine. Journal of Infectious Diseases, 212(6), 861–70.

Human NK cell repertoire diversity reflects immune experience and correlates with viral susceptibility.
Strauss-Albee, D. M., Fukuyama, J., Liang, E. C., Yao, Y., Jarrell, J. A., Drake, A. L., … Blish, C. A. (2015). Human NK cell repertoire diversity reflects immune experience and correlates with viral susceptibility. Science Translational Medicine, 7(297), 297ra115-?

Immunogenicity and clinical efficacy of influenza vaccination in pregnancy
Kay, A. W., & Blish, C. A. (2015). Immunogenicity and clinical efficacy of influenza vaccination in pregnancy. FRONTIERS IN IMMUNOLOGY, 6, 1–9.

Immunogenicity and Clinical Efficacy of Influenza Vaccination in Pregnancy.
Kay, A. W., & Blish, C. A. (2015). Immunogenicity and Clinical Efficacy of Influenza Vaccination in Pregnancy. Frontiers in Immunology, 6, 289-?

The impact of HIV-1 infection and exposure on natural killer (NK) cell phenotype in Kenyan infants during the first year of life
Slyker, J. A., Lohman-Payne, B., John-Stewart, G. C., Dong, T., Mbori-Ngacha, D., Tapia, K., … Blish, C. A. (2012). The impact of HIV-1 infection and exposure on natural killer (NK) cell phenotype in Kenyan infants during the first year of life. FRONTIERS IN IMMUNOLOGY, 3.

Human NK Cell Diversity in viral infection: Ramifications of Ramification
Strauss-Albee, D. M., & Blish, C. A. (2016). Human NK Cell Diversity in viral infection: Ramifications of Ramification. FRONTIERS IN IMMUNOLOGY, 7.

Application of Mass Cytometry (CyTOF) for Functional and Phenotypic Analysis of Natural Killer Cells.
Kay, A. W., Strauss-Albee, D. M., & Blish, C. A. (2016). Application of Mass Cytometry (CyTOF) for Functional and Phenotypic Analysis of Natural Killer Cells. Methods in Molecular Biology (Clifton, N.J.), 1441, 13–26.

NKG2A-Expressing Natural Killer Cells Dominate the Response to Autologous Lymphoblastoid Cells Infected with Epstein-Barr Virus
Hatton, O., Strauss-Albee, D. M., Zhao, N. Q., Haggadone, M. D., Pelpola, J. S., Krams, S. M., … Blish, C. A. (2016). NKG2A-Expressing Natural Killer Cells Dominate the Response to Autologous Lymphoblastoid Cells Infected with Epstein-Barr Virus. FRONTIERS IN IMMUNOLOGY, 7.

Mass Cytometry Analytical Approaches Reveal Cytokine-Induced Changes in Natural Killer Cells.
Vendrame, E., Fukuyama, J., Strauss-Albee, D. M., Holmes, S., & Blish, C. A. (2017). Mass Cytometry Analytical Approaches Reveal Cytokine-Induced Changes in Natural Killer Cells. Cytometry. Part B, Clinical Cytometry, 92(1), 57–67.

The newborn human NK cell repertoire is phenotypically formed but functionally reduced.
Strauss-Albee, D. M., Liang, E. C., Ranganath, T., Aziz, N., & Blish, C. A. (2016). The newborn human NK cell repertoire is phenotypically formed but functionally reduced. Cytometry. Part B, Clinical Cytometry.

Zika Virus Infection Induces Cranial Neural Crest Cells to Produce Cytokines at Levels Detrimental for Neurogenesis.
Bayless, N. L., Greenberg, R. S., Swigut, T., Wysocka, J., & Blish, C. A. (2016). Zika Virus Infection Induces Cranial Neural Crest Cells to Produce Cytokines at Levels Detrimental for Neurogenesis. Cell Host & Microbe, 20(4), 423–28.

Increased Proinflammatory Responses of Monocytes and Plasmacytoid Dendritic Cells to Influenza A Virus Infection During Pregnancy
Le Gars, M., Kay, A. W., Bayless, N. L., Aziz, N., Dekker, C. L., Swan, G. E., … Blish, C. A. (2016). Increased Proinflammatory Responses of Monocytes and Plasmacytoid Dendritic Cells to Influenza A Virus Infection During Pregnancy. JOURNAL OF INFECTIOUS DISEASES, 214(11), 1666–71.

Natural Killer Cell Diversity in Viral Infection: Why and How Much?
Blish, C. A. (2016). Natural Killer Cell Diversity in Viral Infection: Why and How Much? Pathogens & Immunity, 1(1), 165–92.

The natural killer cell response to West Nile virus in young and old individuals with or without a prior history of infection.
Yao, Y., Strauss-Albee, D. M., Zhou, J. Q., Malawista, A., Garcia, M. N., Murray, K. O., … Montgomery, R. R. (2017). The natural killer cell response to West Nile virus in young and old individuals with or without a prior history of infection. PloS One, 12(2).

The newborn human NK cell repertoire is phenotypically formed but functionally reduced
Strauss-Albee, D. M., Liang, E. C., Ranganath, T., Aziz, N., & Blish, C. A. (2017). The newborn human NK cell repertoire is phenotypically formed but functionally reduced. CYTOMETRY PART B-CLINICAL CYTOMETRY, 92(1), 33–41.

Diversification of human NK cells: Lessons from deep profiling.
Wilk, A. J., & Blish, C. A. (2018). Diversification of human NK cells: Lessons from deep profiling. Journal of Leukocyte Biology.

Humanized mouse model supports development, function, and tissue residency of human natural killer cells
Herndler-Brandstetter, D., Shan, L., Yao, Y., Stecher, C., Plajer, V., Lietzenmayer, M., … Flavell, R. A. (2017). Humanized mouse model supports development, function, and tissue residency of human natural killer cells. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 114(45), E9626–E9634.

Redefining Memory: Building the Case for Adaptive NK Cells
Paust, S., Blish, C. A., & Reeves, R. K. (2017). Redefining Memory: Building the Case for Adaptive NK Cells. JOURNAL OF VIROLOGY, 91(20).

Zika virus infection induces cranial neural crest cells to produce cytokines at levels detrimental for neurogenesis
Blish, C. (2017). Zika virus infection induces cranial neural crest cells to produce cytokines at levels detrimental for neurogenesis. JOURNAL OF NEUROIMMUNE PHARMACOLOGY, 12, S9–S10.

Quantifying the unanticipated diversity of the human NK cell repertoire
Strauss-Albee, D., Horowitz, A., Dogan, O., Mackey, S., Swan, G., Dekker, C., … Blish, C. (2013). Quantifying the unanticipated diversity of the human NK cell repertoire. JOURNAL OF IMMUNOLOGY. AMER ASSOC IMMUNOLOGISTS.

Pregnancy does not attenuate the antibody or plasmablast response to inactivated influenza vaccine
Bayless, N., Kay, A., Fukuayama, J., Aziz, N., Dekker, C., Mackey, S., … Blish, C. (2015). Pregnancy does not attenuate the antibody or plasmablast response to inactivated influenza vaccine. JOURNAL OF IMMUNOLOGY, 194.

Natural Killer Cells Display Functional and Receptor Diversity in Response to Alloantigen.
Hatton, O., Shawler, T., Blish, C., Martinez, O., & Krams, S. (2016). Natural Killer Cells Display Functional and Receptor Diversity in Response to Alloantigen. AMERICAN JOURNAL OF TRANSPLANTATION, 16, 721.

Natural Killer Cell Responses to Autologous and Allogeneic Epstein-Barr Virus (EBV)(+) B Cell Lymphomas
Hatton, O., Hadad, U., Strauss-Albee, D., Blish, C., Esquivel, C., Krams, S., & Martinez, O. (2014). Natural Killer Cell Responses to Autologous and Allogeneic Epstein-Barr Virus (EBV)(+) B Cell Lymphomas. TRANSPLANTATION, 98, 245–46.

Natural Killer Cell Responses to Autologous and Allogeneic Epstein-Barr Virus (EBV)(+) B Cell Lymphomas
Hatton, O., Hadad, U., Strauss-Albee, D., Blish, C., Esquivel, C., Krams, S., & Martinez, O. (2014). Natural Killer Cell Responses to Autologous and Allogeneic Epstein-Barr Virus (EBV)(+) B Cell Lymphomas. AMERICAN JOURNAL OF TRANSPLANTATION, 14, 245–46.

IL-2 DEPENDENT NATURAL KILLER CELL RESPONSES TO ALLOGENEIC AND AUTOLOGOUS EPSTEIN-BARR VIRUS (EBV) plus B CELL LYMPHOMAS
Hatton, O., Hadad, U., Blish, C., Esquivel, C., Krams, S., & Martinez, O. (2015). IL-2 DEPENDENT NATURAL KILLER CELL RESPONSES TO ALLOGENEIC AND AUTOLOGOUS EPSTEIN-BARR VIRUS (EBV) plus B CELL LYMPHOMAS. PEDIATRIC TRANSPLANTATION, 19, 93.

IL-2-Dependent Natural Killer Cell Responses to Epstein-Barr Virus B Cell Lymphomas Involve the NKG2A/NKG2C Axis
Hatton, O., Strauss-Albee, D., Blish, C., Esquivel, C., Krams, S., & Martines, O. (2015). IL-2-Dependent Natural Killer Cell Responses to Epstein-Barr Virus B Cell Lymphomas Involve the NKG2A/NKG2C Axis. AMERICAN JOURNAL OF TRANSPLANTATION, 15.

Differential Induction of IFN-alpha and Modulation of CD112 and CD54 Expression Govern the Magnitude of NK Cell IFN-gamma Response to Influenza A Viruses.
Kronstad, L. M., Seiler, C., Vergara, R., Holmes, S. P., & Blish, C. A. (2018). Differential Induction of IFN-alpha and Modulation of CD112 and CD54 Expression Govern the Magnitude of NK Cell IFN-gamma Response to Influenza A Viruses. Journal of Immunology (Baltimore, Md. : 1950).

Maintaining a Robust Pipeline of Future Physician-Scientists
Blish, C. A. (2018). Maintaining a Robust Pipeline of Future Physician-Scientists. JOURNAL OF INFECTIOUS DISEASES, 218, S40–S43.

Natural Killer cells demonstrate functional and receptor diversity in response to alloantigen
Hatton, O., Shawler, T., Blish, C., Martinez, O. M., & Krams, S. M. (2016). Natural Killer cells demonstrate functional and receptor diversity in response to alloantigen. TRANSPLANTATION. LIPPINCOTT WILLIAMS & WILKINS.

NKG2A+natural killer cells dominate the response to latent Epstein-Barr virus infection
Hatton, O., Strauss-Albee, D., Krams, S. M., Blish, C., & Martinez, O. (2016). NKG2A+natural killer cells dominate the response to latent Epstein-Barr virus infection. TRANSPLANTATION. LIPPINCOTT WILLIAMS & WILKINS.

Differential Induction of IFN-alpha and Modulation of CD112 and CD54 Expression Govern the Magnitude of NK Cell IFN-gamma Response to Influenza A Viruses
Kronstad, L. M., Seiler, C., Vergara, R., Holmes, S. P., & Bish, C. A. (2018). Differential Induction of IFN-alpha and Modulation of CD112 and CD54 Expression Govern the Magnitude of NK Cell IFN-gamma Response to Influenza A Viruses. JOURNAL OF IMMUNOLOGY, 201(7), 2117–31.

Human natural killer cells mediate adaptive immunity to viral antigens
Nikzad, R., Angelo, L. S., Aviles-Padilla, K., Le, D. T., Singh, V. K., Bimler, L., … Paust, S. (2019). Human natural killer cells mediate adaptive immunity to viral antigens. SCIENCE IMMUNOLOGY, 4(35).

A novel human IL2RB mutation results in T and NK cell-driven immune dysregulation
Fernandez, I. Z., Baxter, R. M., Garcia-Perez, J. E., Vendrame, E., Ranganath, T., Kong, D. S., … Hsieh, E. W. Y. (2019). A novel human IL2RB mutation results in T and NK cell-driven immune dysregulation. JOURNAL OF EXPERIMENTAL MEDICINE, 216(6), 1255–67.

HLA Upregulation During Dengue Virus Infection Suppresses the Natural Killer Cell Response
McKechnie, J. L., Beltran, D., Pitti, A., Saenz, L., Arauz, A. B., Vergara, R., … Lopez-Verges, S. (2019). HLA Upregulation During Dengue Virus Infection Suppresses the Natural Killer Cell Response. FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 9.

HLA Upregulation During Dengue Virus Infection Suppresses the Natural Killer Cell Response.
McKechnie, J. L., Beltrán, D., Pitti, A., Saenz, L., Araúz, A. B., Vergara, R., … López-Vergès, S. (2019). HLA Upregulation During Dengue Virus Infection Suppresses the Natural Killer Cell Response. Frontiers in Cellular and Infection Microbiology, 9, 268.

Pregnancy-Induced Alterations in NK Cell Phenotype and Function.
Le Gars, M., Seiler, C., Kay, A. W., Bayless, N. L., Starosvetsky, E., Moore, L., … Blish, C. A. (2019). Pregnancy-Induced Alterations in NK Cell Phenotype and Function. Frontiers in Immunology, 10, 2469.

Universal Principled Review: A Community-Driven Method to Improve Peer Review.
Krummel, M., Blish, C., Kuhns, M., Cadwell, K., Oberst, A., Goldrath, A., … Pepper, M. (2019). Universal Principled Review: A Community-Driven Method to Improve Peer Review. Cell, 179(7), 1441–45.

Reinvigorating NIH Grant Peer Review.
Crotty, S., Blish, C., Cadwell, K., Chi, H., Goldrath, A., Green, D., … Wherry, E. J. (2020). Reinvigorating NIH Grant Peer Review. Immunity, 52(1), 1–3.

TIGIT is upregulated by HIV-1 infection and marks a highly functional adaptive and mature subset of natural killer cells.
Vendrame, E., Seiler, C., Ranganath, T., Zhao, N. Q., Vergara, R., Alary, M., … Blish, C. A. (2020). TIGIT is upregulated by HIV-1 infection and marks a highly functional adaptive and mature subset of natural killer cells. AIDS (London, England).

Identification of the first cases of complete CD16A deficiency: Association with persistent EBV infection.
Pérez-Portilla, A., Moraru, M., Blázquez-Moreno, A., Kolb, P., Bravo García-Morato, M., Ranganath, T., … Reyburn, H. T. (2020). Identification of the first cases of complete CD16A deficiency: Association with persistent EBV infection. The Journal of Allergy and Clinical Immunology.

Influenza-Induced Interferon Lambda Response Is Associated With Longer Time to Delivery Among Pregnant Kenyan Women.
Seiler, C., Bayless, N. L., Vergara, R., Pintye, J., Kinuthia, J., Osborn, L., … Blish, C. A. (2020). Influenza-Induced Interferon Lambda Response Is Associated With Longer Time to Delivery Among Pregnant Kenyan Women. Frontiers in Immunology, 11, 452.

Enhancing natural killer cell function with gp41-targeting bispecific antibodies to combat HIV infection.
Ramadoss, N. S., Zhao, N. Q., Richardson, B. A., Grant, P. M., Kim, P. S., & Blish, C. A. (2020). Enhancing natural killer cell function with gp41-targeting bispecific antibodies to combat HIV infection. AIDS (London, England).

Characterization of the Impact of Daclizumab Beta on Circulating Natural Killer Cells by Mass Cytometry.
Ranganath, T., Simpson, L. J., Ferreira, A.-M. M., Seiler, C., Vendrame, E., Zhao, N., … Blish, C. A. (2020). Characterization of the Impact of Daclizumab Beta on Circulating Natural Killer Cells by Mass Cytometry. Frontiers in Immunology, 11, 714.

The Innate Immune System: Fighting on the Front Lines or Fanning the Flames of COVID-19?
McKechnie, J. L., & Blish, C. A. (2020). The Innate Immune System: Fighting on the Front Lines or Fanning the Flames of COVID-19? Cell Host & Microbe.

Treated HIV Infection Alters Phenotype but Not HIV-Specific Function of Peripheral Blood Natural Killer Cells.
Zhao, N. Q., Ferreira, A.-M., Grant, P. M., Holmes, S., & Blish, C. A. (2020). Treated HIV Infection Alters Phenotype but Not HIV-Specific Function of Peripheral Blood Natural Killer Cells. Frontiers in Immunology, 11, 829.

Symptomatic SARS-CoV-2 infections display specific IgG Fc structures.
Chakraborty, S., Edwards, K., Buzzanco, A. S., Memoli, M. J., Sherwood, R., Mallajosyula, V., … Wang, T. T. (2020). Symptomatic SARS-CoV-2 infections display specific IgG Fc structures. MedRxiv : the Preprint Server for Health Sciences.

A single-cell atlas of the peripheral immune response in patients with severe COVID-19.
Wilk, A. J., Rustagi, A., Zhao, N. Q., Roque, J., Martinez-Colon, G. J., McKechnie, J. L., … Blish, C. A. (2020). A single-cell atlas of the peripheral immune response in patients with severe COVID-19. Nature Medicine.

B cell clonal expansion and convergent antibody responses to SARS-CoV-2.
Nielsen, S. C., Yang, F., Hoh, R. A., Jackson, K. J., Roeltgen, K., Lee, J.-Y. Y., … Boyd, S. D. (2020). B cell clonal expansion and convergent antibody responses to SARS-CoV-2. Research Square.

Cytokine profile in plasma of severe COVID-19 does not differ from ARDS and sepsis.
Wilson, J. G., Simpson, L. J., Ferreira, A.-M., Rustagi, A., Roque, J. A., Asuni, A., … Rogers, A. J. (2020). Cytokine profile in plasma of severe COVID-19 does not differ from ARDS and sepsis. JCI Insight.

Human B cell clonal expansion and convergent antibody responses to SARS-CoV-2.
Nielsen, S. C., Yang, F., Jackson, K. J., Hoh, R. A., Röltgen, K., Stevens, B., … Boyd, S. D. (2020). Human B cell clonal expansion and convergent antibody responses to SARS-CoV-2. BioRxiv : the Preprint Server for Biology.

Natural killer cell phenotype is altered in HIV-exposed seronegative women.
Zhao, N. Q., Vendrame, E., Ferreira, A.-M., Seiler, C., Ranganath, T., Alary, M., … Blish, C. A. (2020). Natural killer cell phenotype is altered in HIV-exposed seronegative women. PloS One, 15(9), e0238347.

Charge-altering releasable transporters enable phenotypic manipulation of natural killer cells for cancer immunotherapy.
Wilk, A. J., Weidenbacher, N. L.-B., Vergara, R., Haabeth, O. A., Levy, R., Waymouth, R. M., … Blish, C. A. (2020). Charge-altering releasable transporters enable phenotypic manipulation of natural killer cells for cancer immunotherapy. Blood Advances, 4(17), 4244–55.

Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2.
Nielsen, S. C., Yang, F., Jackson, K. J., Hoh, R. A., Röltgen, K., Jean, G. H., … Boyd, S. D. (2020). Human B Cell Clonal Expansion and Convergent Antibody Responses to SARS-CoV-2. Cell Host & Microbe.

Mass Cytometry Analysis of the NK Cell Receptor-Ligand Repertoire Reveals Unique Differences between Dengue-Infected Children and Adults.
McKechnie, J. L., Beltran, D., Ferreira, A.-M. M., Vergara, R., Saenz, L., Vergara, O., … Blish, C. A. (2020). Mass Cytometry Analysis of the NK Cell Receptor-Ligand Repertoire Reveals Unique Differences between Dengue-Infected Children and Adults. ImmunoHorizons, 4(10), 634–47.

Safety of ACE-I and ARB medications in COVID-19: A retrospective cohort study of inpatients and outpatients in California
Rubin, S. J. S., Falkson, S. R., Degner, N. R., & Blish, C. A. (2020). Safety of ACE-I and ARB medications in COVID-19: A retrospective cohort study of inpatients and outpatients in California. Journal of Clinical and Translational Science, e8.

Proinflammatory IgG Fc structures in patients with severe COVID-19
Chakraborty, S., Gonzales, J., Edwards, K., Mallajosyulla, V., Buzzanco, A. S., Sherwood, R., … Tan, G. S. (2020). Proinflammatory IgG Fc structures in patients with severe COVID-19. Nature Immunology.

Progenitor identification and SARS-CoV-2 infection in human distal lung organoids.
Salahudeen, A. A., Choi, S. S., Rustagi, A., Zhu, J., van Unen, V., de la O, S. M., … Kuo, C. J. (2020). Progenitor identification and SARS-CoV-2 infection in human distal lung organoids. Nature.

Defining the features and duration of antibody responses to SARS-CoV-2 infection associated with disease severity and outcome.
Röltgen, K., Powell, A. E., Wirz, O. F., Stevens, B. A., Hogan, C. A., Najeeb, J., … Boyd, S. D. (2020). Defining the features and duration of antibody responses to SARS-CoV-2 infection associated with disease severity and outcome. Science Immunology, 5(54).

Profiling of the Human Natural Killer Cell Receptor-Ligand Repertoire.
Vendrame, E., McKechnie, J. L., Ranganath, T., Zhao, N. Q., Rustagi, A., Vergara, R., … Blish, C. A. (2020). Profiling of the Human Natural Killer Cell Receptor-Ligand Repertoire. Journal of Visualized Experiments : JoVE, (165).

A historical perspective on ACE2 in the COVID-19 era.
Bhalla, V., Blish, C. A., & South, A. M. (2020). A historical perspective on ACE2 in the COVID-19 era. Journal of Human Hypertension.

SARS-CoV-2 RNAaemia predicts clinical deterioration and extrapulmonary complications from COVID-19.
Ram-Mohan, N., Kim, D., Zudock, E. J., Hashemi, M. M., Tjandra, K. C., Rogers, A. J., … Yang, S. (2020). SARS-CoV-2 RNAaemia predicts clinical deterioration and extrapulmonary complications from COVID-19. MedRxiv : the Preprint Server for Health Sciences.

CytoGLMM: conditional differential analysis for flow and mass cytometry experiments.
Seiler, C., Ferreira, A.-M., Kronstad, L. M., Simpson, L. J., Le Gars, M., Vendrame, E., … Holmes, S. (2021). CytoGLMM: conditional differential analysis for flow and mass cytometry experiments. BMC Bioinformatics, 22(1), 137.

Peginterferon Lambda-1a for treatment of outpatients with uncomplicated COVID-19: a randomized placebo-controlled trial.
Jagannathan, P., Andrews, J. R., Bonilla, H., Hedlin, H., Jacobson, K. B., Balasubramanian, V., … Singh, U. (2021). Peginterferon Lambda-1a for treatment of outpatients with uncomplicated COVID-19: a randomized placebo-controlled trial. Nature Communications, 12(1), 1967.

Synthetic Siglec-9 Agonists Inhibit Neutrophil Activation Associated with COVID-19.
Delaveris, C., Wilk, A., Riley, N., Stark, J., Yang, S., Rogers, A., … Bertozzi, C. (2020). Synthetic Siglec-9 Agonists Inhibit Neutrophil Activation Associated with COVID-19. ChemRxiv : the Preprint Server for Chemistry.

SARS-CoV-2 RNAemia predicts clinical deterioration and extrapulmonary complications from COVID-19.
Ram-Mohan, N., Kim, D., Zudock, E. J., Hashemi, M. M., Tjandra, K. C., Rogers, A. J., … Yang, S. (2021). SARS-CoV-2 RNAemia predicts clinical deterioration and extrapulmonary complications from COVID-19. Clinical Infectious Diseases : an Official Publication of the Infectious Diseases Society of America.

Synthetic Siglec-9 Agonists Inhibit Neutrophil Activation Associated with COVID-19
Delaveris, C. S., Wilk, A. J., Riley, N. M., Stark, J. C., Yang, S. S., Rogers, A. J., … Bertozzi, C. R. (2021). Synthetic Siglec-9 Agonists Inhibit Neutrophil Activation Associated with COVID-19. ACS CENTRAL SCIENCE, 7(4), 650–657.

Integrated analysis of multimodal single-cell data.
Hao, Y., Hao, S., Andersen-Nissen, E., Mauck, W. M., Zheng, S., Butler, A., … Satija, R. (2021). Integrated analysis of multimodal single-cell data. Cell.

SARS-CoV-2 subgenomic RNA kinetics in longitudinal clinical samples
Verma, R., Kim, E., Martinez, G., Jagannathan, P., Rustagi, A., Parsonnet, J., … Andrews, J. (2021). SARS-CoV-2 subgenomic RNA kinetics in longitudinal clinical samples. Open Forum Infectious Diseases.

Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19.
Wilk, A. J., Lee, M. J., Wei, B., Parks, B., Pi, R., Martinez-Colon, G. J., … Blish, C. A. (2021). Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19. The Journal of Experimental Medicine, 218(8).

Clinical characteristics associated with COVID-19 severity in California.
Rubin, S. J., Falkson, S. R., Degner, N. R., & Blish, C. (2020). Clinical characteristics associated with COVID-19 severity in California. Journal of Clinical and Translational Science, 5(1), e3.

Physical Properties of COVID-19 Acute Respiratory Distress Syndrome (ARDS) Sputum
Pacheco-Navarro, A., Kratochvil, M. J., Kaber, G., Roque, J., Blish, C., Yang, S., … Bollyky, P. (2021). Physical Properties of COVID-19 Acute Respiratory Distress Syndrome (ARDS) Sputum. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. AMER THORACIC SOC.

Clinician Prognostic Scoring System Reveals COVID-19 Patients' Prognosis More Likely to Be Limited by Acute Illness Relative to Traditional ICU Patients
Moore, A. R., Pienkos, S., Nadeau, K. C., Blish, C., Yang, S., Wilson, J. G., … Rogers, A. (2021). Clinician Prognostic Scoring System Reveals COVID-19 Patients' Prognosis More Likely to Be Limited by Acute Illness Relative to Traditional ICU Patients. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. AMER THORACIC SOC.

Use of Outpatient-Derived COVID-19 Convalescent Plasma in COVID-19 Patients Before Seroconversion.
Wirz, O. F., Roltgen, K., Stevens, B. A., Pandey, S., Sahoo, M. K., Tolentino, L., … Boyd, S. D. (2021). Use of Outpatient-Derived COVID-19 Convalescent Plasma in COVID-19 Patients Before Seroconversion. Frontiers in Immunology, 12, 739037.

The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.
Meyers, J. M., Ramanathan, M., Shanderson, R. L., Beck, A., Donohue, L., Ferguson, I., … Khavari, P. A. (2021). The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation. PLoS Pathogens, 17(10), e1009412.

Stereotypic Expansion of T Regulatory and Th17 Cells during Infancy Is Disrupted by HIV Exposure and Gut Epithelial Damage.
Dzanibe, S., Lennard, K., Kiravu, A., Seabrook, M. S., Alinde, B., Holmes, S. P., … Gray, C. M. (2021). Stereotypic Expansion of T Regulatory and Th17 Cells during Infancy Is Disrupted by HIV Exposure and Gut Epithelial Damage. Journal of Immunology (Baltimore, Md. : 1950).

Antibodies elicited by SARS-CoV-2 infection or mRNA vaccines have reduced neutralizing activity against Beta and Omicron pseudoviruses.
Sievers, B. L., Chakraborty, S., Xue, Y., Gelbart, T., Gonzalez, J. C., Cassidy, A. G., … Tan, G. S. (1800). Antibodies elicited by SARS-CoV-2 infection or mRNA vaccines have reduced neutralizing activity against Beta and Omicron pseudoviruses. Science Translational Medicine, eabn7842.

Innovative vaccine approaches-a Keystone Symposia report.
Cable, J., Rappuoli, R., Klemm, E. J., Kang, G., Mutreja, A., Wright, G. J., … Karp, C. L. (1800). Innovative vaccine approaches-a Keystone Symposia report. Annals of the New York Academy of Sciences.

The B.1.427/1.429 (epsilon) SARS-CoV-2 variants are more virulent than ancestral B.1 (614G) in Syrian hamsters.
Carroll, T., Fox, D., van Doremalen, N., Ball, E., Morris, M. K., Sotomayor-Gonzalez, A., … Miller, C. J. (2021). The B.1.427/1.429 (epsilon) SARS-CoV-2 variants are more virulent than ancestral B.1 (614G) in Syrian hamsters. BioRxiv : the Preprint Server for Biology.

Association Between SARS-CoV-2 RNAemia and Postacute Sequelae of COVID-19.
Ram-Mohan, N., Kim, D., Rogers, A. J., Blish, C. A., Nadeau, K. C., Blomkalns, A. L., & Yang, S. (2022). Association Between SARS-CoV-2 RNAemia and Postacute Sequelae of COVID-19. Open Forum Infectious Diseases, 9(2), ofab646.

Early immune responses have long-term associations with clinical, virologic, and immunologic outcomes in patients with COVID-19.
Hu, Z., van der Ploeg, K., Chakraborty, S., Arunachalam, P., Mori, D., Jacobson, K., … Jagannathan, P. (2022). Early immune responses have long-term associations with clinical, virologic, and immunologic outcomes in patients with COVID-19. Research Square.

The B.1.427/1.429 (epsilon) SARS-CoV-2 variants are more virulent than ancestral B.1 (614G) in Syrian hamsters.
Carroll, T., Fox, D., van Doremalen, N., Ball, E., Morris, M. K., Sotomayor-Gonzalez, A., … Miller, C. J. (2022). The B.1.427/1.429 (epsilon) SARS-CoV-2 variants are more virulent than ancestral B.1 (614G) in Syrian hamsters. PLoS Pathogens, 18(2), e1009914.

Deep Phenotypic Analysis of Blood and Lymphoid T and NK Cells From HIV+ Controllers and ART-Suppressed Individuals.
George, A. F., Luo, X., Neidleman, J., Hoh, R., Vohra, P., Thomas, R., … Roan, N. R. (2022). Deep Phenotypic Analysis of Blood and Lymphoid T and NK Cells From HIV+ Controllers and ART-Suppressed Individuals. Frontiers in Immunology, 13, 803417.

Natural Killer Cell Receptors and Ligands Are Associated With Markers of HIV-1 Persistence in Chronically Infected ART Suppressed Patients.
Ivison, G. T., Vendrame, E., Martinez-Colon, G. J., Ranganath, T., Vergara, R., Zhao, N. Q., … Blish, C. A. (2022). Natural Killer Cell Receptors and Ligands Are Associated With Markers of HIV-1 Persistence in Chronically Infected ART Suppressed Patients. Frontiers in Cellular and Infection Microbiology, 12, 757846.

Comparative analysis of cell-cell communication at single-cell resolution.
Wilk, A. J., Shalek, A. K., Holmes, S., & Blish, C. A. (2022). Comparative analysis of cell-cell communication at single-cell resolution. BioRxiv : the Preprint Server for Biology.

The immunology and immunopathology of COVID-19.
Merad, M., Blish, C. A., Sallusto, F., & Iwasaki, A. (2022). The immunology and immunopathology of COVID-19. Science (New York, N.Y.), 375(6585), 1122–1127.

Gastrointestinal Perforation in a patient with Anti-nuclear Matrix Protein 2 Antibody Positive Dermatomyositis.
Valenzuela, A., Rieger, K. E., Blish, C. A., Chung, L., & Fiorentino, D. (2022). Gastrointestinal Perforation in a patient with Anti-nuclear Matrix Protein 2 Antibody Positive Dermatomyositis. Arthritis Care & Research.

Facile discovery of surrogate cytokine agonists.
Yen, M., Ren, J., Liu, Q., Glassman, C. R., Sheahan, T. P., Picton, L. K., … Garcia, K. C. (2022). Facile discovery of surrogate cytokine agonists. Cell.

Detection of bacterial co-infections and prediction of fatal outcomes in COVID-19 patients presenting to the emergency department using a 29 mRNA host response classifier.
Ram-Mohan, N., Rogers, A. J., Blish, C. A., Nadeau, K. C., Zudock, E. J., Kim, D., … Yang, S. (2022). Detection of bacterial co-infections and prediction of fatal outcomes in COVID-19 patients presenting to the emergency department using a 29 mRNA host response classifier. MedRxiv : the Preprint Server for Health Sciences.

TNF-alpha+ CD4+ Tcells dominate the SARS-CoV-2 specific T cell response in COVID-19 outpatients and are associated with durable antibodies.
van der Ploeg, K., Kirosingh, A. S., Mori, D. A., Chakraborty, S., Hu, Z., Sievers, B. L., … Jagannathan, P. (2022). TNF-alpha+ CD4+ Tcells dominate the SARS-CoV-2 specific T cell response in COVID-19 outpatients and are associated with durable antibodies. Cell Reports. Medicine, 100640.

Broad-spectrum CRISPR-mediated inhibition of SARS-CoV-2 variants and endemic coronaviruses in vitro.
Zeng, L., Liu, Y., Nguyenla, X. H., Abbott, T. R., Han, M., Zhu, Y., … Qi, L. S. (2022). Broad-spectrum CRISPR-mediated inhibition of SARS-CoV-2 variants and endemic coronaviruses in vitro. Nature Communications, 13(1), 2766.

Anti-nucleocapsid antibody levels and pulmonary comorbid conditions are linked to post-COVID-19 syndrome.
Jia, X., Cao, S., Lee, A. S., Manohar, M., Sindher, S. B., Ahuja, N., … Nadeau, K. C. (2022). Anti-nucleocapsid antibody levels and pulmonary comorbid conditions are linked to post-COVID-19 syndrome. JCI Insight, 7(13).

Genome-wide bidirectional CRISPR screens identify mucins as host factors modulating SARS-CoV-2 infection.
Biering, S. B., Sarnik, S. A., Wang, E., Zengel, J. R., Leist, S. R., Schafer, A., … Hsu, P. D. (2022). Genome-wide bidirectional CRISPR screens identify mucins as host factors modulating SARS-CoV-2 infection. Nature Genetics.

An intranasal ASO therapeutic targeting SARS-CoV-2.
Zhu, C., Lee, J. Y., Woo, J. Z., Xu, L., Nguyenla, X., Yamashiro, L. H., … Näär, A. M. (2022). An intranasal ASO therapeutic targeting SARS-CoV-2. Nature Communications, 13(1), 4503.

Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study.
Ozonoff, A., Schaenman, J., Jayavelu, N. D., Milliren, C. E., Calfee, C. S., Cairns, C. B., … Rouphael, N. (2022). Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study. EBioMedicine, 83, 104208.

Programmable antivirals targeting critical conserved viral RNA secondary structures from influenza A virus and SARS-CoV-2.
Hagey, R. J., Elazar, M., Pham, E. A., Tian, S., Ben-Avi, L., Bernardin-Souibgui, C., … Glenn, J. S. (2022). Programmable antivirals targeting critical conserved viral RNA secondary structures from influenza A virus and SARS-CoV-2. Nature Medicine.

Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy.
Parikh, V. N., Ioannidis, A. G., Jimenez-Morales, D., Gorzynski, J. E., De Jong, H. N., Liu, X., … Ashley, E. A. (2022). Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy. Nature Communications, 13(1), 5107.

The human disease gene LYSET is essential for lysosomal enzyme transport and viral infection.
Richards, C. M., Jabs, S., Qiao, W., Varanese, L. D., Schweizer, M., Mosen, P. R., … Carette, J. E. (2022). The human disease gene LYSET is essential for lysosomal enzyme transport and viral infection. Science (New York, N.Y.), eabn5648.

SARS-CoV-2 infection drives an inflammatory response in human adipose tissue through infection of adipocytes and macrophages.
Martínez-Colón, G. J., Ratnasiri, K., Chen, H., Jiang, S., Zanley, E., Rustagi, A., … McLaughlin, T. L. (2022). SARS-CoV-2 infection drives an inflammatory response in human adipose tissue through infection of adipocytes and macrophages. Science Translational Medicine, eabm9151.

CyTOF analysis identifies unusual immune cells in urine of BCG-treated bladder cancer patients.
Castellano, E., Samba, C., Esteso, G., Simpson, L., Vendrame, E., Garcia-Cuesta, E. M., … Vales-Gomez, M. (2022). CyTOF analysis identifies unusual immune cells in urine of BCG-treated bladder cancer patients. Frontiers in Immunology, 13, 970931.

Early immune markers of clinical, virological, and immunological outcomes in patients with COVID-19: a multi-omics study.
Hu, Z., van der Ploeg, K., Chakraborty, S., Arunachalam, P. S., Mori, D. A., Jacobson, K. B., … Jagannathan, P. (2022). Early immune markers of clinical, virological, and immunological outcomes in patients with COVID-19: a multi-omics study. ELife, 11.

Using a 29-mRNA Host Response Classifier To Detect Bacterial Coinfections and Predict Outcomes in COVID-19 Patients Presenting to the Emergency Department.
Ram-Mohan, N., Rogers, A. J., Blish, C. A., Nadeau, K. C., Zudock, E. J., Kim, D., … Yang, S. (2022). Using a 29-mRNA Host Response Classifier To Detect Bacterial Coinfections and Predict Outcomes in COVID-19 Patients Presenting to the Emergency Department. Microbiology Spectrum, e0230522.

Cytometric analysis reveals an association between allergen-responsive natural killer cells and human peanut allergy.
Zhou, X., Yu, W., Dunham, D. M., Schuetz, J. P., Blish, C. A., DeKruyff, R. H., & Nadeau, K. C. (2022). Cytometric analysis reveals an association between allergen-responsive natural killer cells and human peanut allergy. The Journal of Clinical Investigation, 132(20).

Single-cell RNA-seq methods to interrogate virus-host interactions.
Ratnasiri, K., Wilk, A. J., Lee, M. J., Khatri, P., & Blish, C. A. (2022). Single-cell RNA-seq methods to interrogate virus-host interactions. Seminars in Immunopathology.

SARS-CoV-2 escapes direct NK cell killing through Nsp1-mediated downregulation of ligands for NKG2D.
Lee, M. J., Leong, M. W., Rustagi, A., Beck, A., Zeng, L., Holmes, S., … Blish, C. A. (2022). SARS-CoV-2 escapes direct NK cell killing through Nsp1-mediated downregulation of ligands for NKG2D. Cell Reports, 111892.

Malaria-driven expansion of adaptive-like functional CD56-negative NK cells correlates with clinical immunity to malaria.
Ty, M., Sun, S., Callaway, P. C., Rek, J., Press, K. D., van der Ploeg, K., … Jagannathan, P. (2023). Malaria-driven expansion of adaptive-like functional CD56-negative NK cells correlates with clinical immunity to malaria. Science Translational Medicine, 15(680), eadd9012.

Autoantibodies are highly prevalent in non-SARS-CoV-2 respiratory infections and critical illness.
Feng, A., Yang, E. Y., Moore, A. R., Dhingra, S., Chang, S. E., Yin, X., … Utz, P. J. (2023). Autoantibodies are highly prevalent in non-SARS-CoV-2 respiratory infections and critical illness. JCI Insight, 8(3).

Comparative analysis of cell-cell communication at single-cell resolution.
Wilk, A. J., Shalek, A. K., Holmes, S., & Blish, C. A. (2023). Comparative analysis of cell-cell communication at single-cell resolution. Nature Biotechnology.

Development of a Definition of Postacute Sequelae of SARS-CoV-2 Infection.
Thaweethai, T., Jolley, S. E., Karlson, E. W., Levitan, E. B., Levy, B., McComsey, G. A., … Zisis, S. (2023). Development of a Definition of Postacute Sequelae of SARS-CoV-2 Infection. JAMA.

Inferring cell-cell communication at single-cell resolution
Wilk, A. J., & Blish, C. A. (2023). Inferring cell-cell communication at single-cell resolution. NATURE BIOTECHNOLOGY.

A cytometric survey of immune cell populations reveals an association between allergen-responsive natural killer (NK) cells and human peanut allergy
Zhou, X., Yu, W., Dunham, D., Schuetz, J., Blish, C., Dekruyff, R., & Nadeau, K. (2023). A cytometric survey of immune cell populations reveals an association between allergen-responsive natural killer (NK) cells and human peanut allergy. JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. MOSBY-ELSEVIER.

Defining the role of natural killer cells in COVID-19.
Lee, M. J., & Blish, C. A. (2023). Defining the role of natural killer cells in COVID-19. Nature Immunology.

Longitudinal clinical phenotyping of post COVID condition in Mexican adults recovering from severe COVID-19: a prospective cohort study.
Núñez, I., Gillard, J., Fragoso-Saavedra, S., Feyaerts, D., Islas-Weinstein, L., Gallegos-Guzmán, A. A., … Valdés-Ferrer, S. I. (2023). Longitudinal clinical phenotyping of post COVID condition in Mexican adults recovering from severe COVID-19: a prospective cohort study. Frontiers in Medicine, 10, 1236702.

Uterine Natural Killer Cells Modulate Endometrial Growth and Persistence in Endometriosis
Diop, M., Feyaerts, D., Irwin, J., Einhaus, J., Stelzer, I., Bonham, A., … Gaudilliere, B. (2023). Uterine Natural Killer Cells Modulate Endometrial Growth and Persistence in Endometriosis. JOURNAL OF REPRODUCTIVE IMMUNOLOGY. ELSEVIER IRELAND LTD.

Organoid modeling of lung-resident immune responses to SARS-CoV-2 infection.
Choi, S. S., van Unen, V., Zhang, H., Rustagi, A., Alwahabi, S. A., Santos, A. J., … Kuo, C. J. (2023). Organoid modeling of lung-resident immune responses to SARS-CoV-2 infection. Research Square.

Autoantibodies targeting cytokines and connective tissue disease autoantigens are common in acute non-SARS-CoV-2 infections.
Feng, A., Yang, E., Moore, A., Dhingra, S., Chang, S., Yin, X., … Utz, P. (2022). Autoantibodies targeting cytokines and connective tissue disease autoantigens are common in acute non-SARS-CoV-2 infections. Research Square.

SARS-CoV-2 Antibody Responses Correlate with Resolution of RNAemia But Are Short-Lived in Patients with Mild Illness.
Röltgen, K., Wirz, O. F., Stevens, B. A., Powell, A. E., Hogan, C. A., Najeeb, J., … Boyd, S. D. (2020). SARS-CoV-2 Antibody Responses Correlate with Resolution of RNAemia But Are Short-Lived in Patients with Mild Illness. MedRxiv : the Preprint Server for Health Sciences.

Disrupted memory T cell expansion in HIV-exposed uninfected infants is preceded by premature skewing of T cell receptor clonality.
Dzanibe, S., Wilk, A. J., Canny, S., Ranganath, T., Alinde, B., Rubelt, F., … Gray, C. M. (2023). Disrupted memory T cell expansion in HIV-exposed uninfected infants is preceded by premature skewing of T cell receptor clonality. BioRxiv : the Preprint Server for Biology.

Charge-altering releasable transporters enhance mRNA delivery in vitro and exhibit in vivo tropism.
Li, Z., Amaya, L., Pi, R., Wang, S. K., Ranjan, A., Waymouth, R. M., … Wender, P. A. (2023). Charge-altering releasable transporters enhance mRNA delivery in vitro and exhibit in vivo tropism. Nature Communications, 14(1), 6983.

Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study.
Ozonoff, A., Jayavelu, N. D., Liu, S., Melamed, E., Milliren, C. E., Qi, J., … Rouphael, N. (2024). Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study. Nature Communications, 15(1), 216.

IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition.
Haslund-Gourley, B. S., Woloszczuk, K., Hou, J., Connors, J., Cusimano, G., Bell, M., … Comunale, M. A. (2024). IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition. Nature Communications, 15(1), 404.

Systems immunology of transcriptional responses to viral infection identifies conserved antiviral pathways across macaques and humans.
Ratnasiri, K., Zheng, H., Toh, J., Yao, Z., Duran, V., Donato, M., … Khatri, P. (2024). Systems immunology of transcriptional responses to viral infection identifies conserved antiviral pathways across macaques and humans. Cell Reports, 43(2), 113706.

Pro-inflammatory feedback loops define immune responses to pathogenic Lentivirus infection.
Wilk, A. J., Marceau, J. O., Kazer, S. W., Fleming, I., Miao, V. N., Galvez-Reyes, J., … Blish, C. A. (2024). Pro-inflammatory feedback loops define immune responses to pathogenic Lentivirus infection. Genome Medicine, 16(1), 24.

An orally bioavailable SARS-CoV-2 main protease inhibitor exhibits improved affinity and reduced sensitivity to mutations.
Westberg, M., Su, Y., Zou, X., Huang, P., Rustagi, A., Garhyan, J., … Lin, M. Z. (2024). An orally bioavailable SARS-CoV-2 main protease inhibitor exhibits improved affinity and reduced sensitivity to mutations. Science Translational Medicine, 16(738), eadi0979.

Persistence and free chlorine disinfection of human coronaviruses and their surrogates in water.
Zhang, M., Leong, M. W., Mitch, W. A., Blish, C. A., & Boehm, A. (2024). Persistence and free chlorine disinfection of human coronaviruses and their surrogates in water. Applied and Environmental Microbiology, e0005524.

NK Cell-Monocyte Cross-talk Underlies NK Cell Activation in Severe COVID-19.
Lee, M. J., de Los Rios Kobara, I., Barnard, T. R., Vales Torres, X., Tobin, N. H., Ferbas, K. G., … Blish, C. A. (2024). NK Cell-Monocyte Cross-talk Underlies NK Cell Activation in Severe COVID-19. Journal of Immunology (Baltimore, Md. : 1950).